Bodipy TMR (BoTMR) is one of the Bodipy fluorescent dyes by Molecular Probes (Invitrogen). The emission lies in the range of TAMRA. The dye is coupled through an amino linker and can therefore not be combined with other ester based linkers.

TAMRA has a very intensive fluorescence and has been substituted by Applied Biosystems with NED. BoTMR is qualified as a reporter dye for TaqMan® probes, Duplex applications (combined with FAM).

BoTMR can be combined with Dabcyl, BHQ-1, BHQ-2 and BBQ (BlackBerry) quenchers. We recommend BBQ.

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